ATSAS

  • a program suite for small-angle scattering (SAXS) data analysis from biological macromolecules.

This suite of programs was developed in Dmitri Svergun's group at EMBL Hamburg. Authorship by program is as follows: PRIMUS - P.V. Konarev, A.G. Kikhney, A.V. Sokolova, D.I. Svergun & V.V. Volkov GNOM - D.I. Svergun & A. Semenyuk DAMMIN - D.I. Svergun with M. Kozin, M. Petoukhov, V. Volkov DAMMIF - D. Franke MONSA, GASBOR, SASREF, BUNCH, CORAL, GLOBSYMM, DAMAVER - M.V. Petoukhov & D.I. Svergun MASSHA - P.V. Konarev, M.V. Petoukhov, D.I. Svergun & V.V. Volkov OLIGOMER - D.I. Svergun with A.V. Sokolova, P.V. Konarev, V.V. Volkov MIXTURE - P.V. Konarev, D.I. Svergun1 & V.V. Volkov EOM - P. Bernadó, E. Mylonas, M.V. Petoukhov & D.I. Svergun CRYSOL - D. Svergun, C. Barberato, M. Malfois, V. Volkov, P. Konarev, M. Petoukhov & A. Shkumatov CRYSON - D. Svergun, M. Malfois, M. Petoukhov & A. Shkumatov SUPCOMB - M.B. Kozin, M.V. Petoukhov & D.I. Svergun DARA - A. V. Sokolova, V. V. Volkov & D. I. Svergun SASHA - D.I. Svergun & V.V. Volkov ASSA - M.B. Kozin & D.I. Svergun CREDO - M.V. Petoukhov & D.I. Svergun

Developers

Maxim Petoukhov

Dmitri Svergun

Martin Raditsch

Categories

SAXS

Versions

Citations

PRIMUS, MIXTURE: Konarev. PRIMUS - a Windows-PC based system for small-angle scattering data analysis. J Appl Cryst. 2003. 36:1277-1282.

GNOM: Svergun. Determination of the regularization parameter in indirect-transform methods using perceptual criteria. J. Appl. Crystallogr. 1992. 25:495-503.

DAMMIN, MONSA: Svergun. Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing. Biophys J. 1999. 2879-2886.

DAMMIF: Franke and Svergun.DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering. J. Appl. Cryst. 2009. 42:342-346.

SASREF, BUNCH, CORAL, GLOBSYMM: Petoukhov and Svergun. Global rigid body modelling of macromolecular complexes against small-angle scattering data. Biophys. J. 2005. 89:1237-1250.

MASSHA: Konarev et al. MASSHA - a graphic system for rigid body modelling of macromolecular complexes against solution scattering data. J Appl Cryst. 2001. 34:527-532.

EOM: Bernado et al. Structural Characterization of Flexible Proteins Using Small-Angle X-ray Scattering. J. Am. Chem. Soc. 2007. 129(17):5656-5664.

CRYSOL, CRYSON, : Svergun et al. CRYSOL - a Program to Evaluate X-ray Solution Scattering of Biological Macromolecules from Atomic Coordinates J. Appl. Cryst. 1995. 28:768-773.

SUPCOMB: Kozin & Svergun. Automated matching of high- and low-resolution structural models J Appl Cryst. 2000. 34:33-41.

DAMAVER: Volkov and Svergun. Uniqueness of ab-initio shape determination in small-angle scattering. J. Appl. Cryst. 2003. 36:860-864.

DARA: Sokolova et al. Prototype of a database for rapid protein classification based on solution scattering data. J. Appl. Cryst. 2003. 36:865-868.

License Type

This software is distributed under a Non-Profit license.

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